<tools xmlns="biotoolsSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="biotoolsSchema file:///E:/repos/GitHub/biotoolsShim/genericxml2xml-singletool/versions/biotools-3.3.0/biotools_3.3.0.xsd"><tool><name>Clustal Omega</name><description>Multiple sequence alignment software. The name is occassionally spelled as ClustalOmega, Clustal &#937;, Clustal&#937;, Clustal O, ClustalO.</description><homepage>http://www.clustal.org/omega/</homepage><biotoolsID>clustalo</biotoolsID><biotoolsCURIE>biotools:clustalo</biotoolsCURIE><version>1.0 - 1.2</version><toolType>Command-line tool</toolType><toolType>Library</toolType><topic><uri>http://edamontology.org/topic_0080</uri><term>Sequence analysis</term></topic><operatingSystem>Linux</operatingSystem><operatingSystem>Windows</operatingSystem><operatingSystem>Mac</operatingSystem><license>GPL-2.0</license><collectionID>clustal</collectionID><collectionID>Bioconda</collectionID><collectionID>galaxyPasteur</collectionID><collectionID>DebianMed</collectionID><maturity>Mature</maturity><cost>Free of charge</cost><accessibility>Open access</accessibility><function><operation><uri>http://edamontology.org/operation_0492</uri><term>Multiple sequence alignment</term></operation><input><data><uri>http://edamontology.org/data_2044</uri><term>Sequence</term></data><format><uri>http://edamontology.org/format_1929</uri><term>FASTA</term></format></input><output><data><uri>http://edamontology.org/data_0863</uri><term>Sequence alignment</term></data><format><uri>http://edamontology.org/format_1929</uri><term>FASTA</term></format></output></function><link><url>https://galaxy.pasteur.fr/?tool_id=toolshed.pasteur.fr%2Frepos%2Fdcorreia%2Fclustalo%2Fclustalo%2F1.2.1.1&amp;version=1.2.1.1&amp;__identifer=9si4ugr4fwu</url><type>Galaxy service</type></link><link><url>http://bioinf.ucd.ie/bugzilla/buglist.cgi?quicksearch=clustal</url><type>Issue tracker</type></link><download><url>http://www.clustal.org/omega/#Download</url><type>Downloads page</type></download><download><url>https://tracker.debian.org/pkg/clustalo</url><type>Software package</type><note>Debian package (Debian Med Packaging Team). Source code package 'clustalo' and binary packages including API and its documentation.</note></download><download><url>https://bioconda.github.io/recipes/clustalo/README.html</url><type>Software package</type><note>Conda package (Bioconda channel). Conda recipe at https://github.com/bioconda/bioconda-recipes/tree/master/recipes/clustalo/meta.yaml</note></download><documentation><url>http://www.clustal.org/omega/#Documentation</url><type>General</type></documentation><documentation><url>http://www.clustal.org/omega/README</url><type>User manual</type><note>Clustal README file</note></documentation><documentation><url>http://www.clustal.org/omega/INSTALL</url><type>Installation instructions</type></documentation><publication><doi>10.1038/msb.2011.75</doi><pmid>21988835</pmid><pmcid>PMC3261699</pmcid><type>Primary</type></publication><publication><doi>10.1002/pro.3290</doi><pmid>28884485</pmid><pmcid>PMC5734385</pmcid><type>Primary</type></publication><publication><doi>10.1002/0471250953.bi0313s48</doi><pmid>25501942</pmid><type>Usage</type><note>How to use Clustal Omega. Not open access.</note></publication><credit><name>Clustal helpdesk</name><email>clustalw@ucd.ie</email><typeEntity>Division</typeEntity><typeRole>Primary contact</typeRole></credit><credit><name>Science Foundation Ireland</name><url>http://www.sfi.ie/</url><typeEntity>Funding agency</typeEntity></credit></tool></tools>