<tools xmlns="biotoolsSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="biotoolsSchema file:///E:/repos/GitHub/biotoolsShim/genericxml2xml-singletool/versions/biotools-3.3.0/biotools_3.3.0.xsd"><tool><name>Graphia</name><description>A platform for the graph-based visualisation and analysis of complex data.

Visualisation tool for the creation and analysis of graphs.

Graphia is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets.

Graphia can create and visualise graphs from tables of numeric data and display the structures that result. It can also be used to visualise and analyse any data that is already in the form of a graph.</description><homepage>https://graphia.app/</homepage><biotoolsID>graphia</biotoolsID><biotoolsCURIE>biotools:graphia</biotoolsCURIE><toolType>Desktop application</toolType><topic><uri>http://edamontology.org/topic_0121</uri><term>Proteomics</term></topic><topic><uri>http://edamontology.org/topic_3172</uri><term>Metabolomics</term></topic><topic><uri>http://edamontology.org/topic_3308</uri><term>Transcriptomics</term></topic><topic><uri>http://edamontology.org/topic_0625</uri><term>Genotype and phenotype</term></topic><topic><uri>http://edamontology.org/topic_0092</uri><term>Data visualisation</term></topic><topic><uri>http://edamontology.org/topic_0091</uri><term>Bioinformatics</term></topic><operatingSystem>Windows</operatingSystem><operatingSystem>Mac</operatingSystem><operatingSystem>Linux</operatingSystem><language>C++</language><license>GPL-3.0</license><collectionID>pathway or network visualisation</collectionID><maturity>Mature</maturity><cost>Free of charge</cost><accessibility>Open access</accessibility><function><operation><uri>http://edamontology.org/operation_0337</uri><term>Visualisation</term></operation><operation><uri>http://edamontology.org/operation_3196</uri><term>Genotyping</term></operation><operation><uri>http://edamontology.org/operation_3463</uri><term>Expression correlation analysis</term></operation><operation><uri>http://edamontology.org/operation_3629</uri><term>Deisotoping</term></operation><operation><uri>http://edamontology.org/operation_0306</uri><term>Text mining</term></operation><operation><uri>http://edamontology.org/operation_3927</uri><term>Network analysis</term></operation><operation><uri>http://edamontology.org/operation_3925</uri><term>Network visualisation</term></operation><operation><uri>http://edamontology.org/operation_3501</uri><term>Enrichment analysis</term></operation><input><data><uri>http://edamontology.org/data_3112</uri><term>Gene expression matrix</term></data><format><uri>http://edamontology.org/format_3620</uri><term>xlsx</term></format><format><uri>http://edamontology.org/format_3752</uri><term>CSV</term></format><format><uri>http://edamontology.org/format_3475</uri><term>TSV</term></format></input><input><data><uri>http://edamontology.org/data_2600</uri><term>Pathway or network</term></data><format><uri>http://edamontology.org/format_3822</uri><term>GML</term></format><format><uri>http://edamontology.org/format_3617</uri><term>Graph format</term></format></input><output><data><uri>http://edamontology.org/data_2600</uri><term>Pathway or network</term></data><format><uri>http://edamontology.org/format_3822</uri><term>GML</term></format><format><uri>http://edamontology.org/format_3603</uri><term>PNG</term></format><format><uri>http://edamontology.org/format_3579</uri><term>JPG</term></format><format><uri>http://edamontology.org/format_3508</uri><term>PDF</term></format><format><uri>http://edamontology.org/format_3617</uri><term>Graph format</term></format></output></function><link><url>https://github.com/graphia-app/graphia/discussions</url><type>Discussion forum</type></link><link><url>https://github.com/graphia-app/graphia/issues</url><type>Issue tracker</type></link><link><url>https://github.com/graphia-app</url><type>Repository</type></link><download><url>https://graphia.app/download.html</url><type>Downloads page</type></download><documentation><url>https://graphia.app/userguide.html</url><type>User manual</type></documentation><publication><doi>10.1101/2020.09.02.279349</doi></publication><credit><name>Tom C. Freeman</name><email>tom.freeman@roslin.ed.ac.uk</email><typeEntity>Person</typeEntity></credit><credit><name>Tim Angus</name><email>tim@graphia.app</email><typeEntity>Person</typeEntity></credit><credit><email>info@graphia.app</email><typeEntity>Project</typeEntity><typeRole>Support</typeRole></credit></tool></tools>