<tools xmlns="biotoolsSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="biotoolsSchema file:///E:/repos/GitHub/biotoolsShim/genericxml2xml-singletool/versions/biotools-3.3.0/biotools_3.3.0.xsd"><tool><name>meme_fimo</name><description>A software tool for scanning DNA or protein sequences with motifs described as position-specific scoring matrices.</description><homepage>http://meme-suite.org/tools/meme</homepage><biotoolsID>meme_fimo</biotoolsID><biotoolsCURIE>biotools:meme_fimo</biotoolsCURIE><version>0.0.1</version><toolType>Web application</toolType><topic><uri>http://edamontology.org/topic_0080</uri><term>Sequence analysis</term></topic><topic><uri>http://edamontology.org/topic_0199</uri><term>Genetic variation</term></topic><topic><uri>http://edamontology.org/topic_2269</uri><term>Statistics and probability</term></topic><topic><uri>http://edamontology.org/topic_3473</uri><term>Data mining</term></topic><operatingSystem>Linux</operatingSystem><operatingSystem>Windows</operatingSystem><operatingSystem>Mac</operatingSystem><collectionID>galaxyPasteur</collectionID><collectionID>MEME</collectionID><maturity>Mature</maturity><accessibility>Open access</accessibility><function><operation><uri>http://edamontology.org/operation_0238</uri><term>Sequence motif discovery</term></operation><operation><uri>http://edamontology.org/operation_0415</uri><term>Nucleic acid feature detection</term></operation><operation><uri>http://edamontology.org/operation_3092</uri><term>Protein feature detection</term></operation><operation><uri>http://edamontology.org/operation_2238</uri><term>Statistical calculation</term></operation><input><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_2332</uri><term>XML</term></format></input><input><data><uri>http://edamontology.org/data_0863</uri><term>Sequence alignment</term></data><format><uri>http://edamontology.org/format_1929</uri><term>FASTA</term></format></input><input><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_2330</uri><term>Textual format</term></format></input><output><data><uri>http://edamontology.org/data_2048</uri><term>Report</term></data><format><uri>http://edamontology.org/format_2331</uri><term>HTML</term></format></output><output><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_3475</uri><term>TSV</term></format></output><output><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_3475</uri><term>TSV</term></format></output><output><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_2332</uri><term>XML</term></format></output><output><data><uri>http://edamontology.org/data_0006</uri><term>Data</term></data><format><uri>http://edamontology.org/format_3475</uri><term>TSV</term></format></output></function><link><url>https://galaxy.pasteur.fr/tool_runner?tool_id=meme_fimo</url><type>Galaxy service</type></link><documentation><url>https://galaxy.pasteur.fr/root?tool_id=meme_fimo</url><type>General</type></documentation><publication><doi>10.1093/bioinformatics/btr064</doi><pmid>21330290</pmid><pmcid>PMC3065696</pmcid><type>Primary</type></publication><publication><doi>10.1093/nar/gkw343</doi><pmid>27137889</pmid><pmcid>PMC4987906</pmcid><type>Other</type></publication><publication><doi>10.7490/f1000research.1114334.1</doi><type>Other</type></publication><credit><name>Galaxy Support Team</name><email>galaxy@pasteur.fr</email><typeEntity>Person</typeEntity><typeRole>Primary contact</typeRole></credit></tool></tools>