{"name":"ProtParam","description":"Compute various physical and chemical parameters for a given protein sequence. The computed parameters include the molecular weight, theoretical pI (isoelectric point), amino acid composition, atomic composition, extinction coefficient, estimated half-life, instability index, aliphatic index and grand average of hydropathicity (GRAVY).","homepage":"https://web.expasy.org/protparam","biotoolsID":"protparam","biotoolsCURIE":"biotools:protparam","version":[],"otherID":[],"relation":[],"function":[{"operation":[{"uri":"http://edamontology.org/operation_3767","term":"Protein identification"},{"uri":"http://edamontology.org/operation_2479","term":"Protein sequence analysis"},{"uri":"http://edamontology.org/operation_0236","term":"Sequence composition calculation"},{"uri":"http://edamontology.org/operation_0405","term":"Protein hydrophobic region calculation"},{"uri":"http://edamontology.org/operation_0406","term":"Protein aliphatic index calculation"},{"uri":"http://edamontology.org/operation_0399","term":"Protein extinction coefficient calculation"},{"uri":"http://edamontology.org/operation_0398","term":"Protein molecular weight calculation"}],"input":[],"output":[],"note":null,"cmd":null}],"toolType":["Web application"],"topic":[{"uri":"http://edamontology.org/topic_0154","term":"Small molecules"},{"uri":"http://edamontology.org/topic_0157","term":"Sequence composition, complexity and repeats"},{"uri":"http://edamontology.org/topic_0078","term":"Proteins"},{"uri":"http://edamontology.org/topic_3307","term":"Computational biology"},{"uri":"http://edamontology.org/topic_0121","term":"Proteomics"},{"uri":"http://edamontology.org/topic_0080","term":"Sequence analysis"},{"uri":"http://edamontology.org/topic_1775","term":"Function analysis"}],"operatingSystem":["Linux","Windows","Mac"],"language":[],"license":null,"collectionID":["Proteomics"],"maturity":null,"cost":null,"accessibility":null,"elixirPlatform":[],"elixirNode":[],"elixirCommunity":[],"link":[],"download":[],"documentation":[{"url":"https://web.expasy.org/protparam/protparam-doc.html","type":["General"],"note":null}],"publication":[{"doi":"10.1385/1-59259-584-7:531","pmid":"10027275","pmcid":null,"type":[],"version":null,"note":null,"metadata":null}],"credit":[{"name":"SIB Swiss Institute of Bioinformatics","email":null,"url":null,"orcidid":null,"gridid":null,"rorid":null,"fundrefid":null,"typeEntity":"Institute","typeRole":[],"note":null},{"name":"ProtParam Contact Form","email":null,"url":"https://web.expasy.org/contact","orcidid":null,"gridid":null,"rorid":null,"fundrefid":null,"typeEntity":"Person","typeRole":["Primary contact"],"note":null}],"owner":"SIB","additionDate":"2017-05-16T13:43:46Z","lastUpdate":"2024-11-25T14:11:45.081243Z","editPermission":{"type":"group","authors":["proteomics.bio.tools"]},"validated":1,"homepage_status":0,"elixir_badge":0,"confidence_flag":null}