<tools xmlns="biotoolsSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="biotoolsSchema file:///E:/repos/GitHub/biotoolsShim/genericxml2xml-singletool/versions/biotools-3.3.0/biotools_3.3.0.xsd"><tool><name>Sniffles</name><description>An algorithm for structural variation detection from third generation sequencing alignment.</description><homepage>https://github.com/fritzsedlazeck/Sniffles</homepage><biotoolsID>sniffles</biotoolsID><biotoolsCURIE>biotools:sniffles</biotoolsCURIE><otherID><value>RRID:SCR_017619</value><type>rrid</type></otherID><toolType>Command-line tool</toolType><topic><uri>http://edamontology.org/topic_3175</uri><term>DNA structural variation</term></topic><topic><uri>http://edamontology.org/topic_3168</uri><term>Sequencing</term></topic><operatingSystem>Linux</operatingSystem><operatingSystem>Windows</operatingSystem><operatingSystem>Mac</operatingSystem><license>MIT</license><maturity>Mature</maturity><cost>Free of charge</cost><accessibility>Open access</accessibility><function><operation><uri>http://edamontology.org/operation_2403</uri><term>Sequence analysis</term></operation><operation><uri>http://edamontology.org/operation_3228</uri><term>Structural variation detection</term></operation><input><data><uri>http://edamontology.org/data_1383</uri><term>Sequence alignment (nucleic acid)</term></data><format><uri>http://edamontology.org/format_2572</uri><term>BAM</term></format></input><output><data><uri>http://edamontology.org/data_3498</uri><term>Sequence variations</term></data><format><uri>http://edamontology.org/format_3016</uri><term>VCF</term></format></output></function><download><url>https://github.com/fritzsedlazeck/Sniffles</url><type>Software package</type><note>A Github page with source code, documentation and test datasets.</note></download><documentation><url>https://github.com/fritzsedlazeck/Sniffles/wiki</url><type>General</type><note>A Github wiki.</note></documentation><publication><doi>10.1038/s41592-018-0001-7</doi><pmid>29713083</pmid><pmcid>PMC5990442</pmcid></publication><credit><name>Fritz J Sedlazeck</name><email>fritz.sedlazeck@gmail.com</email><typeEntity>Person</typeEntity><typeRole>Primary contact</typeRole></credit></tool></tools>