Retrieve a specific resource

GET /api/tool/signalp
HTTP 200 OK
Allow: GET, PUT, DELETE, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "name": "SignalP",
    "description": "Prediction of the presence and location of signal peptide cleavage sites in amino acid sequences from different organisms.",
    "homepage": "http://cbs.dtu.dk/services/SignalP/",
    "biotoolsID": "signalp",
    "biotoolsCURIE": "biotools:signalp",
    "version": [
        "4.1"
    ],
    "otherID": [
        {
            "value": "rrid:SCR_015644",
            "type": "rrid",
            "version": null
        }
    ],
    "relation": [],
    "function": [
        {
            "operation": [
                {
                    "uri": "http://edamontology.org/operation_0418",
                    "term": "Protein signal peptide detection"
                },
                {
                    "uri": "http://edamontology.org/operation_0422",
                    "term": "Protein cleavage site prediction"
                }
            ],
            "input": [
                {
                    "data": {
                        "uri": "http://edamontology.org/data_2044",
                        "term": "Sequence"
                    },
                    "format": [
                        {
                            "uri": "http://edamontology.org/format_1929",
                            "term": "FASTA"
                        }
                    ]
                }
            ],
            "output": [
                {
                    "data": {
                        "uri": "http://edamontology.org/data_1277",
                        "term": "Protein features"
                    },
                    "format": [
                        {
                            "uri": "http://edamontology.org/format_2305",
                            "term": "GFF"
                        }
                    ]
                },
                {
                    "data": {
                        "uri": "http://edamontology.org/data_2955",
                        "term": "Sequence report"
                    },
                    "format": []
                }
            ],
            "note": "predicts the presence and location of signal peptide cleavage sites in amino acid sequences from different organisms",
            "cmd": null
        }
    ],
    "toolType": [
        "Command-line tool",
        "Web application"
    ],
    "topic": [
        {
            "uri": "http://edamontology.org/topic_3510",
            "term": "Protein sites, features and motifs"
        }
    ],
    "operatingSystem": [
        "Linux",
        "Mac"
    ],
    "language": [],
    "license": "Other",
    "collectionID": [
        "CBS"
    ],
    "maturity": "Mature",
    "cost": "Free of charge (with restrictions)",
    "accessibility": null,
    "elixirPlatform": [],
    "elixirNode": [],
    "elixirCommunity": [],
    "link": [
        {
            "url": "http://www.cbs.dtu.dk/cgi-bin/sw_request?signalp",
            "type": [
                "Repository"
            ],
            "note": null
        }
    ],
    "download": [
        {
            "url": "http://www.cbs.dtu.dk/cgi-bin/sw_request?signalp",
            "type": "Source code",
            "note": null,
            "version": null
        },
        {
            "url": "http://www.cbs.dtu.dk/cgi-bin/sw_request?signalp",
            "type": "Binaries",
            "note": null,
            "version": null
        }
    ],
    "documentation": [
        {
            "url": "http://www.cbs.dtu.dk/services/SignalP",
            "type": [
                "General"
            ],
            "note": null
        }
    ],
    "publication": [
        {
            "doi": "10.1038/nmeth.1701",
            "pmid": "21959131",
            "pmcid": null,
            "type": [
                "Primary"
            ],
            "version": null,
            "note": null,
            "metadata": {
                "title": "SignalP 4.0: Discriminating signal peptides from transmembrane regions",
                "abstract": "",
                "date": "2011-10-01T00:00:00Z",
                "citationCount": 6571,
                "authors": [
                    {
                        "name": "Petersen T.N."
                    },
                    {
                        "name": "Brunak S."
                    },
                    {
                        "name": "Von Heijne G."
                    },
                    {
                        "name": "Nielsen H."
                    }
                ],
                "journal": "Nature Methods"
            }
        }
    ],
    "credit": [
        {
            "name": "TN Petersen",
            "email": null,
            "url": null,
            "orcidid": null,
            "gridid": null,
            "rorid": null,
            "fundrefid": null,
            "typeEntity": "Person",
            "typeRole": [
                "Developer"
            ],
            "note": null
        },
        {
            "name": "CBS",
            "email": null,
            "url": null,
            "orcidid": null,
            "gridid": null,
            "rorid": null,
            "fundrefid": null,
            "typeEntity": "Institute",
            "typeRole": [
                "Provider"
            ],
            "note": null
        },
        {
            "name": "Henrik Nielsen",
            "email": "hnielsen@cbs.dtu.dk",
            "url": null,
            "orcidid": "http://orcid.org/0000-0002-9412-9643",
            "gridid": null,
            "rorid": null,
            "fundrefid": null,
            "typeEntity": null,
            "typeRole": [
                "Developer"
            ],
            "note": null
        },
        {
            "name": "Henrik Nielsen",
            "email": "hnielsen@cbs.dtu.dk",
            "url": null,
            "orcidid": "http://orcid.org/0000-0002-9412-9643",
            "gridid": null,
            "rorid": null,
            "fundrefid": null,
            "typeEntity": "Person",
            "typeRole": [
                "Primary contact"
            ],
            "note": null
        }
    ],
    "community": null,
    "owner": "lidiamorrone",
    "additionDate": "2015-12-17T14:23:00Z",
    "lastUpdate": "2023-10-17T12:15:14.583961Z",
    "editPermission": {
        "type": "group",
        "authors": [
            "CBS",
            "lidiamorrone",
            "Medicine"
        ]
    },
    "validated": 1,
    "homepage_status": 0,
    "elixir_badge": 0,
    "confidence_flag": null
}